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One hundred randomly evolving populations on an adaptive landscape. From Polly, P. D. 2004. On the simulation of the evolution of morphological shape: multivariate shape under selection and drift. Palaeontologia Electronica, 7.2.7A: 28pp, 2.3MB.
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2011 Lawing, A. M. and P.D. Polly. 2011. Pleistocene climate, phylogeny, and climate envelope models: an integrative approach to better understand species' response to climate change. PLoS ONE, 16: e28554 Polly, P.D., J.T. Eronen, M. Fred, G.P. Dietl, V. Mosbrugger, C. Scheidegger, D.C. Frank, J. Damuth, N.C. Stenseth & M. Fortelius. 2011. History matters: ecometrics and integrative climate change biology. Proceedings of the Royal Society B, 278: 1121-1130. doi:10.1098/rspb.2010.2233 Polly, P.D. and J.T. Eronen. 2011. Mammal associations in the Pleistocene of Britain: implications of ecological niche modelling and a method for reconstrucing palaeoclimate. Pp. 279-304 in N. Ashton, S. G. Lewis, and C. Stringer (eds.), The Ancient Human Occupation of Britain. Elsevier. Gómez-Robles, A. and P. D. Polly. Accepted article. Morphological integration in the hominin dentition: evolutionary, developmental, and functional factors. Evolution, doi: 10.1111/j.1558-5646.2011.01508.x Polly, P.D. and C.B. Stringer. 2011. The Ancient Human Occupation of Britain (AHOB) Database. In R. Macchiarelli and G-C. Weniger (ed.) Pleistocene Databases: Acquisition, Storing, Sharing. Wissenschaftliche Schriften des Neanderthal Museums, 4: 51-60. Polly, P.D., L. Killick, M. Ruddy. 2011. Using left-right asymmetry to estimate non-genetic variability in vole teeth (Arvicolinae, Muridae, Rodentia). Palaeontologia Electronica, 14.3.41A. Johnson, L.J., J.A. Cotton, C.P. Lichtenstein, G.S. Elgar, R.A. Nichols, P.D. Polly, and S.C. Le Comber. 2011. Stops making sense: translational trade-offs and stop codon reassignment. BMC Evolutionary Biology, 11: 227. doi: 10.1186/1471-2148-11-227 Bose, R., C. L. Schneider, L. R. Leighton, and P. D. Polly. 2011. Influence of atrypid morphological shape on Devonian episkeletobiont assemblages from the lower Genshaw Formation of the Traverse Group of Michigan: a geometric morphometric approach. Palaeogeography, Palaeoclimatology, Palaeoecology, 310: 427-441. Ksepka, D.T., M.J. Benton, M.T.Carrano, M.A. Gandolfo, J.J. Head, E.J. Hermsen, W.G. Joyce, K.S. Lamm, J.S.L. Patané, M.J. Phillips, P.D. Polly, J.L. Ware, R.C.M. Warnock, M. van Tuinen, and J.F. Parham. 2011. Synthesizing and databasing fossil calibrations: divergence dating and beyond. Biology Letters, doi: 10.1098/rsbl.2011.0356. 2010 Polly, P.D. 2010. Tiptoeing through the trophics: geographic variation in carnivoran locomotor ecomorphology in relation to environment. Pp. 374-410 in A. Goswami and A. Friscia (eds.), Carnivoran Evolution: New Views on Phylogeny, Form, and Function. Eronen, J.T., P.D. Polly, M. Fred, J. Damuth, D.C. Frank, V. Mosbrugger, C. Scheidegger, N.C. Stenseth, and M. Fortelius. 2010. Ecometrics: The traits that bind the past and present together.Integrative Zoology, 5: 88-101. Goswami, A. and P.D. Polly. 2010 . Methods for studying morphological integration, modularity and covariance evolution. Pp. 213-243 in J. Alroy and G. Hunt (eds.), Quantitative Methods in Paleobiology. Paleontological Society Short Course, October 30th, 2010. The Paleontological Society Papers, Volume 16. Goswami, A. and P.D. Polly. 2010. Modularity constrains morphological evolution in the placental mammal skull. Pp. 141-164 in A. Goswami and A. Friscia (eds.), Carnivoran Evolution: New Views on Phylogeny, Form, and Function. Cambridge University Press. Goswami, A. and P. D. Polly. 2010. The influence of modularity on cranial morphological disparity in Carnivora and Primates (Mammalia). PLoS One, 5, e9517: 1-8 Lawing, A.M. and P.D. Polly. 2010. Geometric morphometrics: recent applications to the study of evolution and development. Journal of Zoology, 280: 1-7 Cardini, A., S. Elton, J.A.F. Diniz-Filho, and P.D. Polly. 2010. Spatial data analysis and ecomorphology using geometric morphometrics: clines in skull size and shape in a widespread African arboreal monkey. Pp. 191-217 in A.M.T. Elewa (ed), Morphometrics for Nonmorphometricians, Lecture Notes in Earth Sciences, Volume 124. Springer: Dordrecht, The Netherlands. Bose, R., C. Schneider, P. D. Polly, and M. M. Yacobucci. 2010. Ecological Interactions between Rhipidomella (Orthides, Brachiopoda) and its endoskeletobionts and predators in the Middle Devonian Dundee Formation of Ohio, USA. Palaios, 25: 196-208. Poroshin, E.A., P.D. Polly, and J.M. Wójcik. 2010. Climate and morphological change on decadal scales: Multiannual variation in the common shrew (Sorex araneus L.) in northeast Russia. Acta Theriologica, 55: 193-202. 2009 Head, J.J., J.I. Bloch, A.K. Hastings, J.R. Bourque, E. Cadena, F. Herrera, P.D. Polly, and C.A. Jaramillo. 2009. Giant boine snake from a Paleocene Neotropical rainforest indicates hotter past equatorial temperatures. Nature, 457: 715-718. Cardini A., D. Nagorsen, P. O'Higgins, P.D. Polly, R.W. Thorington Jr., and P. Tongiorgi. 2009. Detecting biological distinctiveness using geometric morphometrics: an example case from the Vancouver Island marmot. Ethology, Ecology and Evolution, 21: 209-223. Schutz, H., P.D. Polly, J.D. Krieger and R.P. Guralnick. 2009. Differential sexual dimorphism of body regions: a case study examining the cranium and pelvis of Gray foxes (Urocyon). Biological Journal of the Linnean Society, 96: 339-353. 2008 Polly,
P. D. 2008. Adaptive Zones and the Pinniped Ankle: A 3D Quantitative Analysis of Carnivoran Tarsal Evolution. Pp. 165-194 in (E. Sargis and M. Dagosto, Eds.) Mammalian Evolutionary Morphology: A Tribute to Frederick S. Szalay. Springer: Dordrecht, The Netherlands. Polly, P.D. 2008. Developmental dynamics and G-matrices: Can morphometric spaces be used to model evolution and development? Evolutionary Biology, 35. DOI 10.1007/s11692-008-9020-0. Atar, M., R. Yasmin, R. Sharma, S.C. Le Comber, P. Verry, and P.D. Polly. 2008. Of mice and mutations: phenotypic effects of the diabetic db/db and ob/ob mutations on the skull and teeth of mice. European Archives of Paediatric Dentistry, 9: 37-40. Polly, P.D. and N. Macleod.. 2008. Locomotion in fossil carnivora: an application of eigensurface analysis for morphometric comparison of 3D surfaces. Palaeontologia Electronica, 11.2.8A. 2007 Polly, P.D. 2007. Development with a Bite. News & Views. Nature, 449: 413-415. Gündüz, İ, M Jaarola, C. Tez, C. Yeniyurt, P.D. Polly, and J. B. Searle. 2007. Spermophilus taurensis Günduz et al. 2007 and S. torosensis Özkurt et al., 2007 (Scuiridae, Rodentia) are synonyms for the same species of Ground squirrel from the Taurus Mountains of southern Turkey. Zootaxa, 1663: 67-68. Cardini, A., R.W. Thorington, Jr., and P.D. Polly. 2007. Evolutionary acceleration in the most endangered mammal of Canada: speciation and divergence in the Vancouver Island marmot (Rodentia, Sciuridae). Journal of Evolutionary Biology, 20: 1833-1846. Head, J.J. and P.D. Polly. 2007. Dissociation of somatic growth from segmentation drives gigantism in snakes. Biology Letters, 3: 296-298. Polly,
P. D. 2007. Phylogeographic differentiation in Sorex araneus:
morphology in relation to geography and karyotype. Russian Journal
of Theriology, 6: 73-84. Polly,
P. D. 2007. Limbs in mammalian evolution. Chapter 15, pp. 245-268, in Fins
into Limbs: Evolution, Development, and Transformation,
Brian K Hall (ed.). University of Chicago Press: Chicago. Wójcik, J. M., P. D. Polly, A. M. Wójcik, and M. D. Sikorski. 2007. Epigenetic variation of the common shrew, Sorex araneus, in different habitats. Russian Journal of Theriology, 6: 43-49. 2006 Polly, P. D., G. D. Wesley-Hunt, R. E. Heinrich, G. Davis, and P. Houde. 2006.
Earliest known carnivoran auditory bulla and support for a recent origin of crown-group Carnivora (Eutheria, Mammalia). Palaeontology,
49: 1019-1027. Polly, P.D. 2006. Genetics, development, and palaeontology interlock. Heredity,
96: 206-207. Wójcik,
A. M., P. D. Polly, M. D. Sikorski, and J. M. Wójcik.
2006. Selection in a cycling population: differential response among skeletal traits. Evolution, 60: 1925-1935. Rychlik,
L., G. Ramalhinho, and P. D. Polly. 2006. Response to competition
and environmental factors: skull, mandible, and tooth shape
in Polish Water shrews (Neomys, Soricidae, Mammalia). Journal
of Zoological Systematics and Evolutionary Research 44: 339-351.
2005 Caumul,
R. and P. D. Polly. 2005. Phylogenetic and environmental components
of morphological variation: skull, mandible and molar shape
in marmots (Marmota, Rodentia). Evolution, 59: 2460-2472.
Polly,
P.D. 2005. Development, Geography, and Sample Size in P matrix
evolution: molar-shape change in island populations of Sorex
araneus. Evolution and Development, 7(1): 29-41. Polly,
P.D., S.C. Le Comber, and T.M. Burland. 2005. On the occlusal
fit of tribosphenic molars: Are we underestimating species diversity
in the Mesozoic? Journal of Mammalian Evolution, 12: 285-301.
2004 Polly, P. D. 2004. On the simulation of the evolution of morphological
shape: multivariate shape under selection and drift. Palaeontologia
Electronica, 7.2.7A: 28pp, 2.3MB. http://palaeo-electronica.org/2004_2/evo/issue2_04.htm Polly, P. D. and J. J. Head. 2004. Maximum-likelihood identification
of fossils: taxonomic identification of Quaternary marmots (Rodentia,
Mammalia) and identification of vertebral position in the pipesnake
Cylindrophis (Serpentes, Reptilia). In: Elewa A. M. T. (ed.):
Morphometrics-Applications in Biology and Paleontology. Springer-Verlag:
Heidelberg, Germany. Pp. 197-222. 2003 Polly, P. D. 2003. Paleophylogeography of Sorex araneus: molar
shape as a morphological marker for fossil shrews. Mammalia,
68: 233-243. Polly, P. D. 2003. Paleophylogeography: the tempo of geographic
differentiation in marmots (Marmota). Journal of Mammalogy,
84: 369-384. 2002 Polly, P. D. and R. L. Spang. 2002. History of paleontology. Pp. 69-97 in B. S. Baigrie (ed.), History of Modern Science and Mathematics, Vol. 4, Charles Scribner’s Sons, New York. Polly, P. D. 2002. Phylogenetic tests for differences in shape
and the importance of divergence times: Eldredge's enigma explored.
In: N. MacLeod and P. Forey (eds.), Morphology, Shape, and Phylogenetics,
Taylor and Francis, Inc., pp. 220-246. 2001 Polly, P. D. 2001. Paleontology and the comparative method:
Ancestral node reconstructions versus observed node values.
American Naturalist, 157: 596-609. Polly, P. D. 2001. On morphological clocks and paleophylogeography:
Towards a timescale for Sorex hybrid zones. Genetica, 112/113:
339-357. Polly, P. D., J. J. Head, and M. J. Cohn. 2001. Testing modularity
and dissociation: the evolution of regional proportions in snakes
(Serpentes, Vertebrata), pp. 305-335 in: M. Zelditch (ed.),
Beyond Heterochrony: The Evolution of Development. John Wiley
& Sons. Kordikova, E. G., P. D. Polly, V. A. Alifanov, Z. Rocek, G.
F. Gunnell, and A. O Averianov. 2001. Late Cretaceous and early
Tertiary microvertebrates from the North Eastern Aral Sea Region
of Kazakhstan. Journal of Paleontology, 75: 390-400. 2000 Polly, P. D. 2000. Development and evolution occlude: evolution of development in mammalian teeth. Proceedings of the National Academy of Science, 97: 14019-14021. [PDF] Mathur, A. K. and P. D. Polly. 2000. The evolution of enamel
microstructure: How important is amelogenin? Journal of Mammalian
Evolution, 7: 23-42. 1999 Polly, P. D. 1999. Selection. In: R. Springer (ed.), Encyclopedia of Paleontology. Fitzroy Dearborn Publishers, Chicago, pp. 1084-1086. Polly, P. D. 1999. Johannes T. Schmalhausen. In: R. Springer (ed.), Encyclopedia of Paleontology. Fitzroy Dearborn Publishers, Chicago, pp. 1068-1069. Polly, P. D. 1999. Ivan I. Schmalhausen. In: R. Springer (ed.), Encyclopedia of Paleontology. Fitzroy Dearborn Publishers, Chicago, pp. 1069-1070. Polly, P. D. 1999. Creodonta. In: R. Springer (ed.), Encyclopedia of Paleontology. Fitzroy Dearborn Publishers, Chicago, pp. 316-317. Polly, P. D. 1999. Alpheus Hyatt. In: R. Springer (ed.), Encyclopedia of Paleontology. Fitzroy Dearborn Publishers, Chicago, pp. 591-59. 1998 Polly, P. D. 1998. Cope's Rule. Science, 282(5386): 50-51. Polly, P. D. 1998. Variability, selection, and constraints:
development and evolution in viverravid (Carnivora, Mammalia)
molar morphology. Paleobiology, 24: 409-429. Polly, P. D. 1998. Variability in mammalian dentitions: size-related
bias in the coefficient of variation. Biological Journal of
the Linnean Society, 64: 83-99. Polly, P. D. 1998. Cope’s Rule. Science, 282(5386): 50-51. 1997 Polly, P. D. 1997. Ancestry and species definition in paleontology: a stratocladistic analysis of Viverravidae (Carnivora, Mammalia) from Wyoming. Contributions from the Museum of Paleontology, University of Michigan. 30: 1-53. Polly, P. D. 1997. Cross-domain database searching at The Natural History Museum. ASLIB Handbook of Special Librarianship and Information Work, 7th Edition, pp. 441-448. 1996 Polly, P. D. 1996. The skeleton of Gazinocyon vulpeculus n. gen. and comb. (Hyaenodontidae, Creodonta) and the cladistic relationships of Hyaenodontidae (Eutheria, Mammalia). Journal of Vertebrate Paleontology, 16: 303-319. Holroyd, P. A., E. L. Simons, T. M. Bown, P. D. Polly, and M. J. Krause. 1996. New Records of Terrestrial Mammals from the Upper Eocene Qasr El Sagha Formation, Fayum Depression, Egypt. Palaeovertebrata, 25: 175-192. 1994 Padian, K., D. Lindberg, and P. D. Polly. 1994. Cladistics and the fossil record: the uses of history. Annual Review of Earth and Planetary Sciences, 22: 63-91. 1993 Polly, P. D. and B. Lange-Badré. 1993. A new genus Eurotherium (Mammalia, Creodonta) in reference to taxonomic problems with some Eocene hyaenodontids from Eurasia. Comptes Rendus de l'Academie des Sciences (Paris), série II, 317: 991-996. Polly, P. D. 1993. Hyaenodontidae (Creodonta, Mammalia) from the early Eocene Four Mile Fauna and their biostratigraphic implications. PaleoBios, 14(4): 1-10. |
Citations