Sukamol Srikwan Jakobsson

Research Associate/Staff Scientist

The Center for Genomics and Bioinformatics

Indiana University, Bloomington

email: sjakobss@indiana.edu

address: Eigenmann 1013. 1900 E. 10th St. Bloomington, IN 47406-7512

 

 

My research interests are in conservation biology, both with theoritical and practical approaches. Conservation biology is a synthesized field that requires understanding across all levels of the ecosystem. Speciation, species community, interspecific interaction, population viability and genetic variation, and habitat degradation are all equally important in conservation biology. Conservation biologists are trained to develop strong skills in interdisciplinary problem solving, as the complexity of problems associated with natural resource management problems requires knowledge in very diverse fields, spanning from evolutionary biology to law and policy issues.  Until recently, my research focus has been on population conservation and evolutionary genetics, such as genetic erosion in fragmented populations and phylogeny of threatened species, including the development of molecular methods for conservation genetic studies (noninvasive methods.) Although I am still pursuing these research topics, my interest has shifted towards the field of biodiversity informatics. The advancement in computer science and informatics leads to global sharing of biological diversity information, which until recently has been kept mostly in scientists' personal collections. However, the variation of sources and methods used to publish such information confound the ability to utilize different fields of information interactively. This, in turn, hinder the significant progress in the field of conservation biology. Nevertheless, the immense value of biological diversity information makes the task of untangling this mess of information worth investigating.


Research Interests

 

Conservation biology: Habitat fragmentation and genetic erosion, species conservation and phylogenetic study, non-invasive sampling for population genetic studies.

 

Bioinformatics: forensic DNA database and security, protein annotation application, work on biological literature, biodiversity informatics.

 

Education

 

Ph.D. in Biology from the University of California, San Diego, 1997 (conservation biology and population genetics);

B. Sc. in Zoology from Chulalongkorn University, Bangkok, 1991

View Curriculum vitae (pdf)

 

Teaching

 

L504 Introduction to Genome Biology for Physical Scientists

 

 

Publications

 

Srikwan, S., D. Field, and D.S. Woodruff. 1996. Genotyping free-ranging rodents with heterologous PCR primer pairs for hypervariable nuclear microsatellite loci. J. Sci. Soc. Thailand. 22. pp. 267-274.

 

Srikwan, S and D.S. Woodruff. 1997. Molecular genetics and conservation- new tools to save Thailand's wildlife. Journal of Science. V.51 No.2. (March-April 1997) The Science Society of Thailand under the Patronage of His Majesty The King. Thailand (in Thai): 113-119.

 

Srikwan,S and D.S. Woodruff. 1998. DNA Sequence variation And Hornbill Conservation. 69-82 pp. In  Poonswad, P. (Ed). The Asian Hornbills: Ecology And Conservation. Thai Studies In Biodiversity No.2: 336pp.

 

Woodruff, D.S.and S. Srikwan. 1998. Molecular genetics and the conservation of hornbills in fragmented landscape. 257-263 pp. In Poonswad, P. (ed.) The Asian Hornbills: Ecology and Conservation. Thai Studies in Biodiversity No.2: 336pp.

 

Srikwan, S. and D.S. Woodruff. 2000. Chapter 9 Genetic erosion in isolated small-mammal populations following rain forest fragmentation. 149-172 pp. In Andrew Young & Geoff Clarke (eds.)  Genetics, Demography and Viability of Fragmented Populations. Cambridge University Press.

 

Panha, S., S. Srikwan, C. Sutcharit,  P. Tongkerd, and J. B.  Burch. 2000. The use of land snails for island biogeographic analysis in Thailand. Annual Meeting of Geography Society of Thailand, Bangkok, Thailand, 18-20 October 2000, pp. C-103 – C-112 (in Thai).

 

Bohannon, P.,  M. Jakobsson, and S. Srikwan. 2000. Cryptographic Approaches to Privacy in Forensic DNA Databases. PKC2000, Melbourne, Australia.

 

Srikwan, S.  2001. Sustainable agriculture and the biological conservation of fragmented populations. 259-264 pp. In Sustainable Agriculture: Possibility and Direction, the 2nd Asia-Pacific Conference on Sustainable Agriculture, Thailand.

 

Srikwan, S., K. Hufford, L. Eggert, and D.S. Woodruff. 2002. Variable Microsatellite Markers for Genotyping Tree Shrews, Tupaia, and their Potential Use in Genetic Studies of Fragmented Populations. ScienceAsia. 28. pp. 93-97

 

 


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